Error correction of SARS-CoV-2 genomic sequences using a phylogenetic prior
Genotype calling of sequencing data has improved over recent years thanks to technological and statistical breakthroughs. One such advance is the use of imputation-based genotyping methods in human genetics. For haploid and mostly non-recombining organisms, a natural equivalent is to leverage phylogenetic signal for imputation-based genotype calling. SARS-CoV-2 is one such case, and the use of…
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