Pycea: a scverse toolkit for single-cell lineage tracing analysis
Lineage tracing enables reconstruction of cellular histories in development, regeneration, and disease, but integrating lineage data into single-cell analysis workflows remains challenging. We introduce Pycea, a Python toolkit for lineage analysis and visualization, and TreeData, an extension of AnnData that stores lineage trees alongside cellular measurements. TreeData is compatible with Scanpy…
We haven't written up this one. bioRxiv has the full story — the link below goes straight to it.
