Clean Breaks: Attention Force Field Deconvolution of Recombination Across Sequence Manifolds
Homologous recombination and horizontal gene transfer assemble mosaic chromosomes across divergent lineages. Reticulate evolution violates bifurcating trees, yet existing detectors enforce a stark trade-off: phylogenetic changepoint models optimize partitioned topologies at exponential computational cost, whereas sequence triplet heuristics evaluate rapidly but suffer from severe combinatorial…
We haven't written up this one. bioRxiv has the full story — the link below goes straight to it.
