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Novel two-stage deep learning-based approach applied to gene expression data pertaining to esophageal adenocarcinoma boosting biological knowledge discovery

Esophageal cancer (EC) is characterized by complex transcriptional alterations and therapeutic resistance, posing challenges for traditional computational methods. In this study, we propose a deep learning (DL)-based computational framework to identify important genes and biologically relevant pathways in bulk cell RNA-seq data (GSE234304 and GSE273848), which comprise tumor and non-tumor…

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