The core microbiome as a reproducible, data-driven abstraction, not a biological entity
Microbial communities are highly diverse, making it difficult to distinguish stable ecological patterns from stochastic variation. The core microbiome offers a widely used framework for simplification, but prevalence-based definitions are often criticized for relying on arbitrary thresholds. We propose an alternative view in which the core microbiome is not a biologically complete or functionally…
We haven't written up this one. bioRxiv has the full story — the link below goes straight to it.