scDIVA: semi-supervised integration and fine-grained annotation of tumor-immune single-cell atlases
Single-cell atlases of the tumor-immune microenvironment have defined numerous fine-grained immune cell states, but each study uses its own nomenclature and procedure for annotating cell types. Transferring annotations from a reference atlas to a query dataset is complicated by both batch effects and by the presence of query populations that the reference does not contain. Here we present scDIVA,…
We haven't written up this one. bioRxiv has the full story — the link below goes straight to it.
