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Scop3P-Toolkit: executable structure-aware workflows linking PTMs, peptides, and mutations to protein function

Post-translational modifications (PTMs) and genetic variants regulate protein function, signalling, and disease, but their interpretation requires integration of sequence annotations with structural, interaction, and biophysical context. Although resources such as Scop3P, UniProt, the Protein Data Bank, and AlphaFold provide extensive annotations and structural information, integrating these data…

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Transcriptome, glycome, and mucinome analysis reveal zinc is essential for the composition of mucus in the human goblet cell model HT-29-MTX

Scientific Reports, Published online: 11 August 2026; doi:10.1038/s41598-026-66227-4 Transcriptome, glycome, and mucinome analysis reveal zinc is essential for the composition of mucus in the human…

  • Zinc deficiency impacts 1 billion globally, causing health issues
  • Zn deficiency alters HT-29-MTX GC transcriptome and mucin synthesis
  • MUC2 and MUC17 levels increase, complex N-glycans decrease in Zn-deficient GCs