{
  "id": 10358482,
  "title": "DSSNA: An Open-Source GROMACS Module for Automated Analysis of Nucleic Acid Secondary and Tertiary Structure in Molecular Dynamics Simulations",
  "url": "https://urgent.news/2026/09/27/dssna-an-open-source-gromacs-module-for-automated-analysis-of-nucleic",
  "topic": "science",
  "section": "Science",
  "published": "2026-09-27T00:00:00.000Z",
  "source": {
    "name": "bioRxiv",
    "slug": "biorxiv",
    "url": "https://www.biorxiv.org/content/10.64898/2026.09.25.754511v1?rss=1"
  },
  "original_language": "en",
  "account": null,
  "summary": "This work presents DSSNA (Define Spatial Structure of Nucleic Acids) v2026, a free and open-source standalone GROMACS module for the automated analysis of nucleic acid structure based on atomic coordinates. DSSNA reproduces the core functionality of the X3DNA and DSSR approach while extending it to the analysis of molecular dynamics trajectories through integration with the GROMACS software…",
  "key_points": [],
  "editors_take": null,
  "illustration": null,
  "coverage": {
    "outlets": 1,
    "also_reported_by": []
  },
  "ai_generated": true,
  "disclaimer": "Summaries, key points and the editor’s take are written by software from other outlets’ reporting and may contain errors — always check the linked original."
}